Table 3. Nucleotide content and gene count levels of the genome
From: Complete genome sequence of Ilumatobacter coccineum YM16-304T
Attribute | Value | % of totala |
|---|---|---|
Genome size (bp) | 4,830,181 | 100.00% |
DNA Coding region (bp) | 4,490,739 | 92.97% |
DNA G+C content (bp) | 3,250,347 | 67.29% |
Number of replicons | 1 | Â |
Extrachromosomal elements | 0 | Â |
Total genes | 4,346 | Â |
RNA genes | 55 | Â |
rRNA operons | 2 | Â |
Protein-coding genes | 4,291 | 100.00% |
Pseudo genes | 0 | 0.00% |
Genes with function prediction | 2,342 | 54.58% |
Genes in paralog clusters | 1,140 | 26.57% |
Genes assigned to COGs | 3,186 | 74.25% |
Genes assigned Pfam domains | 3,053 | 71.15% |
Genes with signal peptides | 401 | 9.35% |
Genes with transmembrane helices | 876 | 20.41% |
Paralogous groups | 300 | % of totala |