Table 3. Genome Statistics

Estimated genome size (bp)

5,930,035

100.00

Estimated total gap length (bp)

56,737

0.96

DNA coding region (bp)

5,146,184

86.78

DNA G+C content (bp)

3,472,195

58.55

Number of replicons

1

-

Extra-chromosomal elements

0

-

Total genes

5,021

100.00

Protein-coding genes^a

4,869

96.97

RNA genes

74

1.47

rRNA genes

13

0.26

5S rRNA

5

0.10

16S rRNA

4

0.08

23S rRNA

4

0.08

tRNA genes

61

1.21

rRNA operons

4

-

Pseudo-genes

78

1.55

Protein coding genes with function prediction

4,200

83.65

without function prediction^a

669

13.32

Protein coding genes with COGs

4,013

79.92

with KOGs

1,698

33.82

with Pfam

4,256

84.76

with TIGRfam

1,641

32.68

in paralog clusters

3,933

78.33

Proteins with signal peptides

511

10.18

Proteins with transmembrane helices

1,112

22.15