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Table 1. Classification and general features of P. caeruleus DSM 24564T according to the MIGS recommendations [29].

From: Genome sequence of Phaeobacter caeruleus type strain (DSM 24564T), a surface-associated member of the marine Roseobacter clade

MIGS ID

Property

Term

Evidence code

 

Current classification

Domain Bacteria

TAS [30]

 

Phylum Proteobacteria

TAS [31]

 

Class Alphaproteobacteria

TAS [32,33]

 

Order Rhodobacterales

TAS [33,34]

 

Family Rhodobacteraceae

TAS [34,35]

 

Genus Phaeobacter

TAS [14,36]

 

Species Phaeobacter caeruleus

TAS [1]

MIGS-7

Subspecific genetic lineage (strain)

13T

TAS [1]

MIGS-12

Reference for biomaterial

Vandecandelaere et al.

TAS [1]

 

Gram stain

Gram-negative

TAS [1]

 

Cell shape

Rod-shaped

TAS [1]

 

Motility

Motile

NAS

 

Sporulation

Not reported

 

MIGS-6.1

Temperature range

4–45°C

TAS [1]

MIGS-6.1

Optimum temperature

20°C

IDA

MIGS-6.3

Salinity

NaCl 2–5% (optimal, 3–4%)

TAS [1]

MIGS-22

Relationship to oxygen

Aerobe

TAS [1]

 

Carbon source

Amino acid (tyrosine), DNA

TAS [1]

 

Energy metabolism

Not reported

 

MIGS-6

Habitat

Marine

TAS [1]

MIGS-6.2

pH

pH 6.0–9.0 (optimal, pH 6.5–8.0)

TAS [1]

MIGS-15

Biotic relationship

Biofilm

TAS [1]

MIGS-14

Known pathogenicity

Not reported

 

MIGS-16

Specific host

Not reported

 

MIGS-18

Health status of host

Not reported

 
 

Biosafety level

1

TAS [37]

MIGS-19

Trophic level

Not reported

 

MIGS-23

Isolation

biofilm on stainless steel electrode

TAS [1]

MIGS-4

Geographic location

Italy, Genoa, harbor

TAS [1]

MIGS-5

Time of sample collection

before 2009

NAS

MIGS-4.1

Latitude

44.37

TAS [1]

MIGS-4.2

Longitude

8.94

TAS [1]

MIGS-4.3

Depth

Not reported

 

MIGS-4.4

Altitude

Not reported

 
  1. Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [38].