Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 175 | 4.0 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 365 | 8.4 | Transcription |
L | 296 | 6.8 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 43 | 1.0 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 53 | 1.2 | Defense mechanisms |
T | 182 | 4.2 | Signal transduction mechanisms |
M | 221 | 5.1 | Cell wall/membrane/envelope biogenesis |
N | 55 | 1.3 | Cell motility |
Z | 2 | 0.1 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 75 | 1.7 | Intracellular trafficking and secretion, and vesicular transport |
O | 157 | 3.6 | Posttranslational modification, protein turnover, chaperones |
C | 273 | 6.3 | Energy production and conversion |
G | 168 | 3.9 | Carbohydrate transport and metabolism |
E | 550 | 12.6 | Amino acid transport and metabolism |
F | 95 | 2.2 | Nucleotide transport and metabolism |
H | 188 | 4.3 | Coenzyme transport and metabolism |
I | 172 | 4.0 | Lipid transport and metabolism |
P | 220 | 5.1 | Inorganic ion transport and metabolism |
Q | 152 | 3.5 | Secondary metabolites biosynthesis, transport and catabolism |
R | 513 | 11.8 | General function prediction only |
S | 393 | 9.0 | Function unknown |
- | 1,263 | 24.2 | Not in COGs |