Table 3. Genome Statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 5,344,253 | 100.00 |
DNA coding region (bp) | 4,678,916 | 87.55 |
DNA G+C content (bp) | 3,278,568 | 61.35 |
Number of scaffolds | 8 | |
Extrachromosomal elements | 7 | |
Total genes | 5,218 | 100.00 |
RNA genes | 89 | 1.71 |
rRNA operons | 4 | |
tRNA genes | 61 | 1.17 |
Protein-coding genes | 5,129 | 98.29 |
Genes with function prediction (proteins) | 4,196 | 80.41 |
Genes in paralog clusters | 4,110 | 78.77 |
Genes assigned to COGs | 3,955 | 75.80 |
Genes assigned Pfam domains | 4,253 | 81.51 |
Genes with signal peptides | 419 | 8.03 |
Genes with transmembrane helices | 1,037 | 19.87 |
CRISPR repeats | 0 |