Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 172 | 4.11 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 299 | 7.14 | Transcription |
L | 249 | 5.95 | Replication, recombination and repair |
B | 4 | 0.10 | Chromatin structure and dynamics |
D | 39 | 0.93 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0 | Nuclear structure |
V | 63 | 1.50 | Defense mechanisms |
T | 113 | 2.70 | Signal transduction mechanisms |
M | 199 | 4.75 | Cell wall/membrane/envelope biogenesis |
N | 33 | 0.79 | Cell motility |
Z | 0 | 0 | Cytoskeleton |
W | 0 | 0 | Extracellular structures |
U | 77 | 1.84 | Intracellular trafficking, secretion, and vesicular transport |
O | 147 | 3.51 | Posttranslational modification, protein turnover, chaperones |
C | 288 | 6.88 | Energy production and conversion |
G | 209 | 4.99 | Carbohydrate transport and metabolism |
E | 523 | 12.49 | Amino acid transport and metabolism |
F | 88 | 2.10 | Nucleotide transport and metabolism |
H | 167 | 3.99 | Coenzyme transport and metabolism |
I | 247 | 5.9 | Lipid transport and metabolism |
P | 217 | 5.18 | Inorganic ion transport and metabolism |
Q | 159 | 3.8 | Secondary metabolites biosynthesis, transport and catabolism |
R | 509 | 12.16 | General function prediction only |
S | 384 | 9.17 | Function unknown |
1,083 | 22.12 | Not in COGs | |
- | 4,187 | - | Total |