Table 4. Number of genes associated with the 25 general COG functional categories
Code | Value | %agea | Description |
|---|---|---|---|
J | 149.0 | 6.5 | Translation |
A | 0.0 | 0.0 | RNA processing and modification |
K | 164.0 | 7.1 | Transcription |
L | 119.0 | 5.2 | Replication, recombination and repair |
B | 1.0 | 0.04 | Chromatin structure and dynamics |
D | 27.0 | 1.2 | Cell cycle control, mitosis and meiosis |
Y | 0.0 | 0.0 | Nuclear structure |
V | 24.0 | 1.0 | Defense mechanisms |
T | 162.0 | 7.0 | Signal transduction mechanisms |
M | 95.0 | 4.1 | Cell wall/membrane biogenesis |
N | 75.0 | 3.3 | Cell motility |
Z | 0.0 | 0.0 | Cytoskeleton |
W | 0.0 | 0.0 | Extracellular structures |
U | 44.0 | 1.9 | Intracellular trafficking and secretion |
O | 97.0 | 4.2 | Posttranslational modification, protein turnover, chaperones |
C | 155 | 6.7 | Energy production and conversion |
G | 79.0 | 3.4 | Carbohydrate transport and metabolism |
E | 239.0 | 10.4 | Amino acid transport and metabolism |
F | 61.0 | 2.7 | Nucleotide transport and metabolism |
H | 93.0 | 4.0 | Coenzyme transport and metabolism |
I | 97.0 | 4.2 | Lipid transport and metabolism |
P | 127.0 | 5.5 | Inorganic ion transport and metabolism |
Q | 38.0 | 1.7 | Secondary metabolites biosynthesis, transport and catabolism |
R | 261.0 | 11.3 | General function prediction only |
S | 193.0 | 8.4 | Function unknown |
- | 1424 | 41.2 | Not in COGs |