Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Slackia heliotrinireducens type strain (RHS 1T)
Code | Value | % age | Description |
|---|---|---|---|
J | 139 | 5.0 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 208 | 7.4 | Transcription |
L | 134 | 4.8 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 25 | 0.9 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 48 | 1.7 | Defense mechanisms |
T | 107 | 3.8 | Signal transduction mechanisms |
M | 93 | 3.3 | Cell wall/membrane biogenesis |
N | 3 | 0.1 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 30 | 1.1 | Intracellular trafficking and secretion |
O | 83 | 3.0 | Posttranslational modification, protein turnover, chaperones |
C | 229 | 8.2 | Energy production and conversion |
G | 68 | 2.4 | Carbohydrate transport and metabolism |
E | 151 | 5.4 | Amino acid transport and metabolism |
F | 58 | 2.1 | Nucleotide transport and metabolism |
H | 109 | 3.9 | Coenzyme transport and metabolism |
I | 66 | 2.4 | Lipid transport and metabolism |
P | 101 | 3.6 | Inorganic ion transport and metabolism |
Q | 33 | 1.2 | Secondary metabolites biosynthesis, transport and catabolism |
R | 319 | 11.4 | General function prediction only |
S | 155 | 5.5 | Function unknown |
- | 829 | 29.6 | Not in COGs |