Table 4c. Number of Thermus thermophilus JL-18 genes associated with the 25 general COG functional categories

J

148

6.79

Translation

A

1

0.05

RNA processing and modification

K

104

4.77

Transcription

L

130

5.97

Replication, recombination and repair

B

2

0.09

Chromatin structure and dynamics

D

33

1.51

Cell cycle control, mitosis and meiosis

Y

0

0

Nuclear structure

V

25

1.15

Defense mechanisms

T

67

3.07

Signal transduction mechanisms

M

87

3.99

Cell wall/membrane biogenesis

N

30

1.38

Cell motility

Z

1

0.05

Cytoskeleton

W

0

0

Extracellular structures

U

57

2.62

Intracellular trafficking and secretion

O

82

3.76

Posttranslational modification, protein turnover, chaperones

C

149

6.84

Energy production and conversion

G

125

5.74

Carbohydrate transport and metabolism

E

216

9.91

Amino acid transport and metabolism

F

64

2.94

Nucleotide transport and metabolism

H

119

5.46

Coenzyme transport and metabolism

I

94

4.31

Lipid transport and metabolism

P

96

4.41

Inorganic ion transport and metabolism

Q

57

2.62

Secondary metabolites biosynthesis, transport and catabolism

R

291

13.35

General function prediction only

S

201

9.22

Function unknown

-

516

20.57

Not in COGs