Skip to main content

Advertisement

Table 4. Number of genes associated with the general COG functional categories

From: High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5T)

Code Value %age Description
J 153 5.29 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 203 7.01 Transcription
L 225 7.77 Replication, recombination and repair
B 0 0.00 Chromatin structure and dynamics
D 23 0.79 Cell cycle control, cell division, chromosome partitioning
Y 0 0.00 Nuclear structure
V 50 1.73 Defense mechanisms
T 123 4.25 Signal transduction mechanisms
M 222 7.67 Cell wall/membrane/envelope biogenesis
N 6 0.21 Cell motility
Z 0 0.00 Cytoskeleton
W 0 0.00 Extracellular structures
U 62 2.14 Intracellular trafficking, secretion, and vesicular transport
O 119 4.11 Posttranslational modification, protein turnover, chaperones
C 133 4.60 Energy production and conversion
G 189 6.53 Carbohydrate transport and metabolism
E 211 7.29 Amino acid transport and metabolism
F 64 2.21 Nucleotide transport and metabolism
H 144 4.98 Coenzyme transport and metabolism
I 97 3.35 Lipid transport and metabolism
P 206 7.12 Inorganic ion transport and metabolism
Q 50 1.73 Secondary metabolites biosynthesis, transport and catabolism
R 346 11.96 General function prediction only
S 268 9.26 Function unknown
- 1326 33.12 Not in COGs