Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 153 | 5.29 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 203 | 7.01 | Transcription |
L | 225 | 7.77 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 23 | 0.79 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.00 | Nuclear structure |
V | 50 | 1.73 | Defense mechanisms |
T | 123 | 4.25 | Signal transduction mechanisms |
M | 222 | 7.67 | Cell wall/membrane/envelope biogenesis |
N | 6 | 0.21 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 62 | 2.14 | Intracellular trafficking, secretion, and vesicular transport |
O | 119 | 4.11 | Posttranslational modification, protein turnover, chaperones |
C | 133 | 4.60 | Energy production and conversion |
G | 189 | 6.53 | Carbohydrate transport and metabolism |
E | 211 | 7.29 | Amino acid transport and metabolism |
F | 64 | 2.21 | Nucleotide transport and metabolism |
H | 144 | 4.98 | Coenzyme transport and metabolism |
I | 97 | 3.35 | Lipid transport and metabolism |
P | 206 | 7.12 | Inorganic ion transport and metabolism |
Q | 50 | 1.73 | Secondary metabolites biosynthesis, transport and catabolism |
R | 346 | 11.96 | General function prediction only |
S | 268 | 9.26 | Function unknown |
- | 1326 | 33.12 | Not in COGs |