Table 4. Number of genes associated with the general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 144 | 6.8 | Translation, ribosomal structure and biogenesis |
A | … | … | RNA processing and modification |
K | 140 | 6.6 | Transcription |
L | 214 | 10.0 | Replication, recombination and repair |
B | … | … | Chromatin structure and dynamics |
D | 36 | 1.7 | Cell cycle control, cell division, chromosome partitioning |
Y | … | … | Nuclear structure |
V | 40 | 1.9 | Defense mechanisms |
T | 81 | 3.8 | Signal transduction mechanisms |
M | 171 | 8.0 | Cell wall/membrane biogenesis |
N | 7 | 0.3 | Cell motility |
Z | … | … | Cytoskeleton |
W | … | … | Extracellular structures |
U | 56 | 2.6 | Intracellular trafficking and secretion, and vesicular transport |
O | 77 | 3.6 | Posttranslational modification, protein turnover, chaperones |
C | 127 | 6.0 | Energy production and conversion |
G | 165 | 7.7 | Carbohydrate transport and metabolism |
E | 141 | 6.6 | Amino acid transport and metabolism |
F | 56 | 2.6 | Nucleotide transport and metabolism |
H | 92 | 4.3 | Coenzyme transport and metabolism |
I | 55 | 2.6 | Lipid transport and metabolism |
P | 113 | 5.3 | Inorganic ion transport and metabolism |
Q | 20 | 0.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 259 | 12.2 | General function prediction only |
S | 137 | 6.4 | Function unknown |
- | 1,328 | 40.2 | Not in COGs |