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Table 4. Number of genes associated with the general COG functional categories

From: Genome of the marine alphaproteobacterium Hoeflea phototrophica type strain (DFL-43T)

Code Value %age Description
J 178 4.58 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 274 7.05 Transcription
L 162 4.17 Replication, recombination and repair
B 2 0.05 Chromatin structure and dynamics
D 27 0.69 Cell cycle control, cell division, chromosome partitioning
Y - - Nuclear structure
V 39 1.00 Defense mechanisms
T 175 4.50 Signal transduction mechanisms
M 205 5.27 Cell wall/membrane/envelope biogenesis
N 60 1.54 Cell motility
Z 0 0.00 Cytoskeleton
W - - Extracellular structures
U 66 1.70 Intracellular trafficking, secretion, and vesicular transport
O 135 3.47 Posttranslational modification, protein turnover, chaperones
C 226 5.81 Energy production and conversion
G 325 8.36 Carbohydrate transport and metabolism
E 405 10.41 Amino acid transport and metabolism
F 80 2.06 Nucleotide transport and metabolism
H 157 4.04 Coenzyme transport and metabolism
I 188 4.83 Lipid transport and metabolism
P 178 4.58 Inorganic ion transport and metabolism
Q 130 3.34 Secondary metabolites biosynthesis, transport and catabolism
R 524 13.47 General function prediction only
S 353 9.08 Function unknown
- 773 18.00 Not in COGs