Table 3. Genome Statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 5,461,856 | 100.00 |
DNA coding region (bp) | 4,871,168 | 89.19 |
DNA G+C content (bp) | 3,080,828 | 56.41 |
Number of replicons | 3 | |
Extrachromosomal elements | 2 | |
Total genes | 5,144 | 100.00 |
RNA genes | 73 | 1.42 |
rRNA operons | 3 | |
tRNA genes | 52 | 1.01 |
Protein-coding genes | 5,071 | 98.58 |
Pseudo genes | 0 | |
Genes with function prediction | 4,168 | 81.03 |
Genes in paralog clusters | 1,866 | 36.28 |
Genes assigned to COGs | 4,140 | 80.48 |
Genes assigned Pfam domains | 4,203 | 81.71 |
Genes with signal peptides | 1,147 | 22.30 |
Genes with transmembrane helices | 1,264 | 24.57 |
CRISPR repeats | 0 |