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Table 1. Classification and general features of the four metagenome data sets according to the Minimum Information about Genomes and Metagenomes (MIMS) standards [13].

From: Metagenomes of tropical soil-derived anaerobic switchgrass-adapted consortia with and without iron

MIMS ID

Property

Term

Evidence codea

 

Current classification

Metagenome ecological metagenome terrestrial metagenome

TAS [5]

 

Carbon source

Switchgrass

IDA

 

Energy source

Switchgrass

IDA

 

Terminal electron receptor

Iron reduction or fermentation

TAS [8]

MIGS-6

Habitat

Consortia (mixed community) derived from wet tropical forest soils

TAS [8]

MIGS-14

Pathogenicity

none

NAS

MIGS-4

Geographic location

Wet tropical forest, Puerto Rico, USA

 

MIGS-5

Sample collection time

April, 2009

 

MIGS-4.1

Latitude

18°18□N

 

MIGS-4.2

Longitude

65°50□W

 

MIGS-4.3

Depth

0–10 cm

TAS [8]

MIGS-4.4

Altitude

250 masl

TAS [8]

  1. a Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [14].