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Table 4. Number of genes associated with the 25 general COG functional categories

From: Non contiguous-finished genome sequence and description of Peptoniphilus senegalensis sp. nov.

Code

Value

%agea

Description

J

141

8.08

Translation

A

0

0

RNA processing and modification

K

102

5.85

Transcription

L

106

6.08

Replication, recombination and repair

B

1

0.06

Chromatin structure and dynamics

D

19

1.09

Cell cycle control, mitosis and meiosis

Y

0

0

Nuclear structure

V

62

3.56

Defense mechanisms

T

56

3.21

Signal transduction mechanisms

M

57

3.27

Cell wall/membrane biogenesis

N

4

0.23

Cell motility

Z

0

0

Cytoskeleton

W

0

0

Extracellular structures

U

22

1.26

Intracellular trafficking and secretion

O

58

3.33

Posttranslational modification, protein turnover, chaperones

C

92

5.28

Energy production and conversion

G

41

2.35

Carbohydrate transport and metabolism

E

115

6.59

Amino acid transport and metabolism

F

56

3.21

Nucleotide transport and metabolism

H

46

2.64

Coenzyme transport and metabolism

I

40

2.29

Lipid transport and metabolism

P

81

4.64

Inorganic ion transport and metabolism

Q

22

1.26

Secondary metabolites biosynthesis, transport and catabolism

R

179

10.26

General function prediction only

S

122

7.0

Function unknown

-

432

24.77

Not in COGs

  1. a The total is based on the total number of protein coding genes in the annotated genome.