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Table 1. Classification and general features of Alistipes obesi strain ph8T according to the MIGS recommendations [21]

From: Non contiguous-finished genome sequence and description of Alistipes obesi sp. nov.

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [22]

 

Phylum Bacteroidetes

TAS [23,24]

 

Class Bacteroidia

TAS [23,25]

 

Order Bacteroidales

TAS [23,26]

 

Family Rikenellaceae

TAS [23,27]

 

Genus Alistipes

TAS [28,29]

 

Species Alistipes obesi

IDA

 

Type strain ph8T

IDA

 

Gram stain

Negative

IDA

 

Cell shape

Rod

IDA

 

Motility

Motile

IDA

 

Sporulation

Non sporulating

IDA

 

Temperature range

Mesophile

IDA

 

Optimum temperature

37°C

IDA

MIGS-6.3

Salinity

Unknown

IDA

MIGS-22

Oxygen requirement

Anaerobic

IDA

 

Carbon source

Unknown

NAS

 

Energy source

Unknown

NAS

MIGS-6

Habitat

Human gut

IDA

MIGS-15

Biotic relationship

Free living

IDA

 

Pathogenicity

Unknown

NAS

 

Biosafety level

2

 

MIGS-14

Isolation

Human feces

 

MIGS-4

Geographic location

France

IDA

MIGS-5

Sample collection time

January 2011

IDA

MIGS-4.1

Latitude

43.296482

IDA

MIGS-4.1

Longitude

5.36978

IDA

MIGS-4.3

Depth

Surface

IDA

MIGS-4.4

Altitude

0 m above sea level

IDA

  1. Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [30]. If the code is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.