Table 2. Project information

MIGS-31

Finishing quality

Finished

MIGS-28

Libraries used

Three libraries: one illumina library, two 454 paired-end libraries (3kb and 8kb insert size), one PacBio standard library

MIGS-29

Sequencing platforms

Illumina GAIIx, 454 GS FLX Titanium, PacBio RS

MIGS-31.2

Fold coverage

6121.2x illumina, 166.9× 454, 31.7× PacBio

MIGS-30

Assemblers

Mira v3.4.0.1 [28]; Amos v3.0.0 [29]; WGS v7.0.1.22 [30]; Velvet v1.2.06 [31]

MIGS-32

Gene calling method

Glimmer [31]

Genome Database release

Genbank ID

CP003789

Genbank Date of Release

On publication, or August 31, 2013

GOLD ID

Project relevance

Agriculture