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Table 2. Genome sequencing project information

From: The Genomic Blueprint of Salmonella enterica subspecies enterica serovar Typhi P-stx-12

MIGS ID

Property

Term

MIGS-31

Finishing quality

Finished

MIGS-28

Libraries used

One 454 paired-end library (4-kb insert size), one Illumina library

MIGS-29

Sequencing platforms

Illumina GA IIx, 454 GS FLX Titanium

MIGS-31.2

Fold coverage

100× Illumina, 18× pyrosequencing

MIGS-30

Assemblers

Newbler, Burrows-Wheeler Alignment

MIGS-32

Gene calling method

Glimmer, RNAmmer, tRNAscan-SE

 

Genbank ID

CP003278 (Chromosome)

 

CP003279 (Plasmid)

 

Genbank Date of Release

February 1, 2012

 

Project relevance

Biotechnology, Pathway, Pathogenic