Table 5. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 155 | 5.41 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03 | RNA processing and modification |
K | 185 | 6.46 | Transcription |
L | 141 | 4.92 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 20 | 0.70 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.00 | Nuclear structure |
V | 44 | 1.54 | Defense mechanisms |
T | 81 | 2.83 | Signal transduction mechanisms |
M | 126 | 4.40 | Cell wall/membrane biogenesis |
N | 0 | 0.00 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 25 | 0.87 | Intracellular trafficking and secretion, and vesicular transport |
O | 88 | 3.07 | Posttranslational modification, protein turnover, chaperones |
C | 176 | 6.14 | Energy production and conversion |
G | 183 | 6.39 | Carbohydrate transport and metabolism |
E | 262 | 9.14 | Amino acid transport and metabolism |
F | 68 | 2.37 | Nucleotide transport and metabolism |
H | 122 | 4.26 | Coenzyme transport and metabolism |
I | 88 | 3.07 | Lipid transport and metabolism |
P | 196 | 6.84 | Inorganic ion transport and metabolism |
Q | 85 | 2.97 | Secondary metabolites biosynthesis, transport and catabolism |
R | 360 | 12.57 | General function prediction only |
S | 214 | 7.47 | Function unknown |
- | 631 | 22.02 | Not in COGs |