Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 160 | 5.0 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 293 | 9.1 | Transcription |
L | 177 | 5.5 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 49 | 1.5 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 59 | 1.8 | Defense mechanisms |
T | 246 | 7.7 | Signal transduction mechanisms |
M | 161 | 5.0 | Cell wall/membrane/envelope biogenesis |
N | 88 | 2.7 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 81 | 2.5 | Intracellular trafficking, secretion, and vesicular transport |
O | 107 | 3.3 | Posttranslational modification, protein turnover, chaperones |
C | 252 | 7.9 | Energy production and conversion |
G | 155 | 4.8 | Carbohydrate transport and metabolism |
E | 279 | 8.7 | Amino acid transport and metabolism |
F | 65 | 2.0 | Nucleotide transport and metabolism |
H | 147 | 4.6 | Coenzyme transport and metabolism |
I | 54 | 1.7 | Lipid transport and metabolism |
P | 154 | 4.8 | Inorganic ion transport and metabolism |
Q | 36 | 1.1 | Secondary metabolites biosynthesis, transport and catabolism |
R | 351 | 10.9 | General function prediction only |
S | 297 | 9.3 | Function unknown |
- | 1,089 | 27.3 | Not in COGs |