Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 165 | 6.1 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 148 | 5.5 | Transcription |
L | 159 | 5.9 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 28 | 1.0 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 70 | 2.6 | Defense mechanisms |
T | 125 | 4.7 | Signal transduction mechanisms |
M | 277 | 10.3 | Cell wall/membrane biogenesis |
N | 12 | 0.5 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 49 | 1.8 | Intracellular trafficking and secretion, and vesicular transport |
O | 105 | 3.9 | Posttranslational modification, protein turnover, chaperones |
C | 125 | 4.7 | Energy production and conversion |
G | 146 | 5.4 | Carbohydrate transport and metabolism |
E | 217 | 8.1 | Amino acid transport and metabolism |
F | 61 | 2.3 | Nucleotide transport and metabolism |
H | 131 | 4.9 | Coenzyme transport and metabolism |
I | 94 | 3.5 | Lipid transport and metabolism |
P | 131 | 4.9 | Inorganic ion transport and metabolism |
Q | 59 | 2.2 | Secondary metabolites biosynthesis, transport and catabolism |
R | 336 | 12.5 | General function prediction only |
S | 250 | 9.3 | Function unknown |
- | 1,131 | 31.2 | Not in COGs |