Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 158 | 6.3 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 156 | 6.2 | Transcription |
L | 125 | 5.0 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 33 | 1.3 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 40 | 1.6 | Defense mechanisms |
T | 228 | 9.1 | Signal transduction mechanisms |
M | 142 | 5.7 | Cell wall/membrane/envelope biogenesis |
N | 86 | 3.4 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 50 | 2.0 | Intracellular trafficking, secretion, and vesicular transport |
O | 91 | 3.6 | Posttranslational modification, protein turnover, chaperones |
C | 134 | 5.3 | Energy production and conversion |
G | 296 | 11.8 | Carbohydrate transport and metabolism |
E | 188 | 7.5 | Amino acid transport and metabolism |
F | 67 | 2.7 | Nucleotide transport and metabolism |
H | 77 | 3.1 | Coenzyme transport and metabolism |
I | 60 | 2.4 | Lipid transport and metabolism |
P | 77 | 3.1 | Inorganic ion transport and metabolism |
Q | 26 | 1.1 | Secondary metabolites biosynthesis, transport and catabolism |
R | 293 | 11.7 | General function prediction only |
S | 182 | 7.3 | Function unknown |
- | 658 | 22.5 | Not in COGs |