Table 4. Number of genes associated with general COG functional categories.
Code | Value | %age | Description |
|---|---|---|---|
J | 163.0 | 4.6 | Translation, ribosomal structure and biogenesis |
A | 2.0 | 0.1 | RNA processing and modificatin |
K | 293.0 | 8.3 | Transcription |
L | 142.0 | 4.0 | Replication, recombination and repair |
B | 0.0 | 0.0 | Chromatin structure and dynamics |
D | 24.0 | 0.7 | Cell cycle control, Cell division, chromosome partitioning |
Y | 0.0 | 0.0 | Nuclear structure |
V | 98.0 | 2.8 | Defense mechanisms |
T | 174.0 | 4.9 | Signal transduction mechanisms |
M | 307.0 | 8.7 | Cell wall/membrane biogenesis |
N | 56.0 | 1.6 | Cell motility |
Z | 2.0 | 0.1 | Cytoskeleton |
W | 0.0 | 0.0 | Extracellular structures |
U | 113.0 | 3.2 | Intracellular trafficking and secretion |
O | 122.0 | 3.4 | Posttranslational modification, protein turnover, chaperones |
C | 196.0 | 5.5 | Energy production and conversion |
G | 303.0 | 8.6 | Carbohydrate transport and metabolism |
E | 243.0 | 6.9 | Amino acid transport and metabolism |
F | 69.0 | 2.0 | Nucleotide transport and metabolism |
H | 134.0 | 3.8 | Coenzyme transport and metabolism |
I | 116.0 | 3.3 | Lipid transport and metabolism |
P | 134.0 | 3.8 | Inorganic ion transport and metabolism |
Q | 85.0 | 2.4 | Secondary metabolites biosynthesis, transport and catabolism |
R | 443.0 | 12.5 | General function prediction only |
S | 323.0 | 9.1 | Function unknown |
1163. | |||
- | 0 | 26.8 | Not in COGs |