Table 4. Number of genes associated with the general COG functional categories
Code | value | % age | Description |
|---|---|---|---|
J | 176 | 4.5 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 303 | 7.7 | Transcription |
L | 118 | 3.0 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 30 | 0.8 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 54 | 1.4 | Defense mechanisms |
T | 181 | 4.6 | Signal transduction mechanisms |
M | 210 | 5.3 | Cell wall/membrane biogenesis |
N | 8 | 0.2 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 36 | 0.9 | Intracellular trafficking and secretion, and vesicular transport |
O | 148 | 3.8 | Posttranslational modification, protein turnover, chaperones |
C | 291 | 7.4 | Energy production and conversion |
G | 270 | 6.9 | Carbohydrate transport and metabolism |
E | 504 | 12.8 | Amino acid transport and metabolism |
F | 77 | 2.0 | Nucleotide transport and metabolism |
H | 156 | 4.0 | Coenzyme transport and metabolism |
I | 143 | 3.6 | Lipid transport and metabolism |
P | 229 | 5.8 | Inorganic ion transport and metabolism |
Q | 105 | 2.7 | Secondary metabolites biosynthesis, transport and catabolism |
R | 487 | 12.4 | General function prediction only |
S | 405 | 10.3 | Function unknown |
- | 981 | 21.5 | Not in COGs |