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Table 3. Genome Statistics

From: Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093T)

Attribute

Value

% of Total

Genome size (bp)

4,765,023

100.00%

DNA coding region (bp)

4,222,317

88.61%

DNA G+C content (bp)

3,234,723

67.88%

Number of replicons

1

 

Extrachromosomal elements

0

 

Total genes

4,563

100.00%

RNA genes

52

1.14%

rRNA operons

1

 

tRNA genes

46

1.01%

Protein-coding genes

4,511

98.86%

Pseudo genes

80

1.75%

Genes with function prediction (proteins)

3,413

74.80%

Genes in paralog clusters

2,690

58.95%

Genes assigned to COGs

3,582

78.50%

Genes assigned Pfam domains

3,730

81.74%

Genes with signal peptides

1,730

37.91%

Genes with transmembrane helices

1,169

25.62%

CRISPR repeats

0

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