Table 3. Genome statistics
From: Complete genome sequence of the plant-associated Serratia plymuthica strain AS13
Attribute | Value | % of totala |
|---|---|---|
Genome size (bp) | 5,442,549 | 100.00% |
DNA Coding region (bp) | 4,770,475 | 87.65% |
DNA G+C content (bp) | 3,045,680 | 55.96% |
Total genes | 5,139 | 100.00% |
RNA genes | 112 | 2.18% |
rRNA operons | 7 | 0.14% |
Protein-coding genes | 4,951 | 96.34% |
Pseudogenes | 76 | 1.48% |
Genes in paralog clusters | 112 | 2.18% |
Genes assigned to COGs | 3,805 | 74.04% |
Genes assigned in Pfam domains | 4,183 | 81.39% |
Genes with signal peptides | 676 | 13.15% |
Genes with transmembrane helices | 1,228 | 23.89% |
CRISPR repeats | 1 | % of totala |