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Table 1. Classification and general features of S. plymuthica AS13 according to the MIGS recommendations [16]

From: Complete genome sequence of the plant-associated Serratia plymuthica strain AS13

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [17]

 

Phylum Proteobacteria

TAS [18]

 

Class Gammaproteobacteria

TAS [19,20]

 

Order “Enterobacteriales

TAS [21]

 

Family Enterobacteriaceae

TAS [2224]

 

Genus Serratia

TAS [22,25,26]

 

Species Serratia plymuthica

TAS [22,27]

 

Strain AS13

IDA

 

Gram stain

Negative

IDA

 

Cell shape

Rod-shaped

IDA

 

Motility

Motile

IDA

 

Sporulation

Non-sporulating

IDA

 

Temperature range

Mesophilic

IDA

 

Optimum temperature

28°C

IDA

 

Carbon source

Glucose, inositol, arabinose, succinate, sucrose, fructose

IDA

 

Energy metabolism

Chemoorganotrophic

IDA

MIGS-6

Habitat

Rapeseed roots

IDA

MIGS-6.3

Salinity

Medium

IDA

MIGS-22

Oxygen

Facultative

IDA

MIGS-15

Biotic relationship

Plant associated

TAS [6]

MIGS-14

Pathogenicity

None

IDA

 

Biosafety level

1

TAS [28]

MIGS-4

Geographic location

Uppsala, Sweden

NAS

MIGS-5

Sample collection time

Summer 1998

IDA

MIGS-4.1

Latitude

59.8

NAS

MIGS-4.2

Longitude

17.65

NAS

MIGS-4.3

Depth

0.1 m

NAS

MIGS-4.4

Altitude

24–25 m

NAS

  1. a) Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [29]. If the evidence code is IDA, then the property should have been directly observed, for the purpose of this specific publication, for a live isolate by one of the authors, or an expert or reputable institution mentioned in the acknowledgements.