Skip to main content

Table 1. Classification and general features of Peptoniphilus timonensis strain JC401T according to the MIGS recommendation [8]

From: Non contiguous-finished genome sequence and description of Peptoniphilus timonensis sp. nov.

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [9]

 

Phylum Firmicutes

TAS [1012]

 

Class Clostridia

TAS [13,14]

 

Order Clostridiales

TAS [15,16]

 

Family XI Incertae sedis

TAS [15,16]

 

Genus Peptoniphilus

TAS [5]

 

Species Peptoniphilus timonensis

IDA

 

Type strain JC401T

IDA

 

Gram stain

Positive

IDA

 

Cell shape

Coccoid

IDA

 

Motility

Nonmotile

IDA

 

Sporulation

Nonsporulating

IDA

 

Temperature range

Mesophile

IDA

 

Optimum temperature

37°C

IDA

MIGS-6.3

Salinity

Growth in BHI medium + 1% NaCl

IDA

MIGS-22

Oxygen requirement

Anaerobic

IDA

 

Carbon source

Unknown

NAS

 

Energy source

Unknown

NAS

MIGS-6

Habitat

Human gut

IDA

MIGS-15

Biotic relationship

Free living

IDA

 

Pathogenicity

Unknown

 
 

Biosafety level

2

 

MIGS-14

Isolation

Human feces

NAS

MIGS-4

Geographic location

Senegal

IDA

MIGS-5

Sample collection time

September 2010

IDA

MIGS-4.1

Latitude

13.7167

IDA

MIGS-4.1

Longitude

−16.4167

IDA

MIGS-4.3

Depth

Surface

IDA

MIGS-4.4

Altitude

51 m above sea level

IDA

  1. Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [17]. If the evidence is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.