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Table 4. Number of genes associated with the general COG functional categories*

From: Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9T) and comparison to “Dehalococcoides” strains

Code Value %age Description
J 126 9.2 Translation, ribosomal structure and biogenesis
A 0 0.0 RNA processing and modification
K 73 5.3 Transcription
L 148 10.8 Replication, recombination and repair
B 2 0.2 Chromatin structure and dynamics
D 13 1.0 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 19 1.4 Defense mechanisms
T 84 6.2 Signal transduction mechanisms
M 25 1.8 Cell wall/membrane biogenesis
N 13 1.0 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 30 2.2 Intracellular trafficking, secretion, and vesicular transport
O 64 4.7 Posttranslational modification, protein turnover, chaperones
C 127 9.3 Energy production and conversion
G 45 3.3 Carbohydrate transport and metabolism
E 126 9.2 Amino acid transport and metabolism
F 47 3.4 Nucleotide transport and metabolism
H 84 6.2 Coenzyme transport and metabolism
I 34 2.5 Lipid transport and metabolism
P 56 4.1 Inorganic ion transport and metabolism
Q 11 0.8 Secondary metabolites biosynthesis, transport and catabolism
R 142 10.4 General function prediction only
S 97 7.1 Function unknown
- 514 29.0 Not in COGs
  1. *detailed COG categorization is available at the IMG web site [15].