Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 150 | 6.8 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 134 | 6.1 | Transcription |
L | 158 | 7.1 | Replication, recombination and repair |
B | 1 | 0.1 | Chromatin structure and dynamics |
D | 32 | 1.5 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 44 | 2.0 | Defense mechanisms |
T | 93 | 4.2 | Signal transduction mechanisms |
M | 101 | 4.6 | Cell wall/membrane/envelope biogenesis |
N | 30 | 1.4 | Cell motility |
Z | 1 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 50 | 2.3 | Intracellular trafficking, secretion, and vesicular transport |
O | 95 | 4.3 | Posttranslational modification, protein turnover, chaperones |
C | 122 | 5.5 | Energy production and conversion |
G | 105 | 4.8 | Carbohydrate transport and metabolism |
E | 177 | 8.0 | Amino acid transport and metabolism |
F | 75 | 3.4 | Nucleotide transport and metabolism |
H | 109 | 4.9 | Coenzyme transport and metabolism |
I | 80 | 3.6 | Lipid transport and metabolism |
P | 119 | 5.4 | Inorganic ion transport and metabolism |
Q | 38 | 1.7 | Secondary metabolites biosynthesis, transport and catabolism |
R | 299 | 13.5 | General function prediction only |
S | 199 | 9.0 | Function unknown |
- | 757 | 27.1 | Not in COGs |