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Table 4. Number of genes associated with the general COG functional categories

From: Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4T)

Code value %age Description
J 159 5.1 Translation, ribosomal structure and biogenesis
A 2 0.1 RNA processing and modification
K 254 8.1 Transcription
L 191 6.1 Replication, recombination and repair
B 0 0.0 Chromatin structure and dynamics
D 35 1.1 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 54 1.7 Defense mechanisms
T 267 8.5 Signal transduction mechanisms
M 194 6.2 Cell wall/membrane biogenesis
N 152 4.8 Cell motility
Z 1 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 112 3.6 Intracellular trafficking and secretion, and vesicular transport
O 94 3.0 Posttranslational modification, protein turnover, chaperones
C 245 7.8 Energy production and conversion
G 120 3.8 Carbohydrate transport and metabolism
E 201 6.4 Amino acid transport and metabolism
F 69 2.2 Nucleotide transport and metabolism
H 183 5.8 Coenzyme transport and metabolism
I 87 2.8 Lipid transport and metabolism
P 135 4.3 Inorganic ion transport and metabolism
Q 32 1.0 Secondary metabolites biosynthesis, transport and catabolism
R 361 11.5 General function prediction only
S 201 6.4 Function unknown
- 884 24.1 Not in COGs