Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 149 | 8.1 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 98 | 5.3 | Transcription |
L | 147 | 7.9 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 31 | 1.7 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 14 | 0.8 | Defense mechanisms |
T | 77 | 4.2 | Signal transduction mechanisms |
M | 99 | 5.4 | Cell wall/membrane biogenesis |
N | 61 | 3.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 50 | 2.7 | Intracellular trafficking and secretion, and vesicular transport |
O | 60 | 3.2 | Posttranslational modification, protein turnover, chaperones |
C | 160 | 8.6 | Energy production and conversion |
G | 91 | 4.9 | Carbohydrate transport and metabolism |
E | 229 | 12.4 | Amino acid transport and metabolism |
F | 56 | 3.0 | Nucleotide transport and metabolism |
H | 77 | 4.2 | Coenzyme transport and metabolism |
I | 40 | 2.2 | Lipid transport and metabolism |
P | 73 | 3.9 | Inorganic ion transport and metabolism |
Q | 31 | 1.7 | Secondary metabolites biosynthesis, transport and catabolism |
R | 189 | 10.2 | General function prediction only |
S | 117 | 6.3 | Function unknown |
- | 288 | 14.6 | Not in COGs |