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Table 4. Number of genes associated with the 25 general COG functional categories

From: Complete genome sequence of Serratia plymuthica strain AS12

Code Value % age Description
J 201 4.27 Translation, ribosomal structure and biogenesis
A 1 0.02 RNA processing and modification
K 481 10.22 Transcription
L 160 3.40 Replication, recombination and repair
B 1 0.02 Chromatin structure and dynamics
D 37 0.79 Cell division and chromosome partitioning
Y 0 0.00 Nuclear structure
V 64 1.36 Defense mechanisms
T 187 3.97 Signal transduction mechanisms
M 265 5.63 Cell envelope biogenesis, Outer membrane
N 94 2.00 Cell motility and secretion
Z 0 0.00 Cytoskeleton
W 0 0.00 Extracellular structure
U 116 2.47 Intracellular trafficking and secretion
O 153 3.25 Posttranslational modification, protein turnover, chaperones
C 272 5.78 Energy production and conversion
G 424 9.01 Carbohydrate transport and metabolism
E 470 9.99 Amino acid transport and metabolism
F 106 2.25 Nucleotide transport and metabolism
H 185 3.93 Coenzyme metabolism
I 135 2.87 Lipid metabolism
P 285 6.06 Inorganic ion transport and metabolism
Q 133 2.83 Secondary metabolite biosynthesis, transport and catabolism
R 537 11.41 General function prediction only
S 398 8.46 Function unknown
- 918 17.86 Not in COGs