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Table 3. Genome statistics

From: Complete genome sequence of Serratia plymuthica strain AS12

Attribute Value % of totala
Genome size (bp) 5,443,009 100.00%
DNA Coding region (bp) 4,772,809 87.69%
DNA G+C content (bp) 3,045,986 55.96%
Total genesb 5,139 100.00%
RNA genes 112 2.18%
rRNA operons 7 0.14%
Protein-coding genes 4,952 96.36%
Pseudo genes 75 1.46%
Genes in paralog clusters 2721 52.95%
Genes assigned to COGs 3,808 74.10%
Genes assigned in Pfam domains 4,184 81.41%
Genes with signal peptides 675 13.13%
Genes with transmembrane helices 1,228 23.89%
CRISPR repeats 1  
  1. a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.