Skip to main content

Table 1. Classification and general features of S. plymuthica AS12 according to MIGS recommendations [14]

From: Complete genome sequence of Serratia plymuthica strain AS12

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [15]

  

Phylum Proteobacteria

TAS [16]

  

Class Gammaproteobacteria

TAS [17,18]

  

Order “Enterobacteriales

TAS [19]

  

Family Enterobacteriaceae

TAS [2022]

  

Genus Serratia

TAS [20,23,24]

  

Species Serratia plymuthica

TAS [20,25]

  

Strain AS12

IDA

 

Gram stain

Negative

IDA

 

Cell shape

Rod-shaped

IDA

 

Motility

Motile

IDA

 

Sporulation

Non-sporulating

IDA

 

Temperature range

Mesophilic, 4 – 40°C

IDA

 

Optimum temperature

28°C

IDA

 

Carbon source

Glucose, sucrose, fructose, succinate, trehalose, mannitol, inositol, arabinose

IDA

 

Energy metabolism

Chemoorganotrophic

IDA

MIGS-6

Habitat

Rapeseed roots

IDA

MIGS-6.3

Salinity

Medium

IDA

MIGS-22

Oxygen

Facultative

IDA

MIGS-15

Biotic relationship

Endophyte

TAS [5]

MIGS-14

Pathogenicity

None

NAS

 

Biosafety level

1+

TAS [26]

MIGS-4

Geographic location

Uppsala, Sweden

NAS

MIGS-5

Sample collection time

Summer 1998

NAS

MIGS-4.1

Latitude

59.8

NAS

MIGS-4.2

Longitude

17.65

NAS

MIGS-4.3

Depth

0.1 m

NAS

MIGS-4.4

Altitude

24–25 m

NAS

  1. a) Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [27]. If the evidence code is IDA, then the property should have been directly observed, for the purpose of this specific publication, for a live isolate by one of the authors, or an expert or reputable institution mentioned in the acknowledgements.