Skip to main content

Table 1. Classification and general features of S. plymuthica AS12 according to MIGS recommendations [14]

From: Complete genome sequence of Serratia plymuthica strain AS12

MIGS ID Property Term Evidence codea
  Current classification Domain Bacteria TAS [15]
   Phylum Proteobacteria TAS [16]
   Class Gammaproteobacteria TAS [17,18]
   Order “Enterobacteriales TAS [19]
   Family Enterobacteriaceae TAS [2022]
   Genus Serratia TAS [20,23,24]
   Species Serratia plymuthica TAS [20,25]
   Strain AS12 IDA
  Gram stain Negative IDA
  Cell shape Rod-shaped IDA
  Motility Motile IDA
  Sporulation Non-sporulating IDA
  Temperature range Mesophilic, 4 – 40°C IDA
  Optimum temperature 28°C IDA
  Carbon source Glucose, sucrose, fructose, succinate, trehalose, mannitol, inositol, arabinose IDA
  Energy metabolism Chemoorganotrophic IDA
MIGS-6 Habitat Rapeseed roots IDA
MIGS-6.3 Salinity Medium IDA
MIGS-22 Oxygen Facultative IDA
MIGS-15 Biotic relationship Endophyte TAS [5]
MIGS-14 Pathogenicity None NAS
  Biosafety level 1+ TAS [26]
MIGS-4 Geographic location Uppsala, Sweden NAS
MIGS-5 Sample collection time Summer 1998 NAS
MIGS-4.1 Latitude 59.8 NAS
MIGS-4.2 Longitude 17.65 NAS
MIGS-4.3 Depth 0.1 m NAS
MIGS-4.4 Altitude 24–25 m NAS
  1. a) Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [27]. If the evidence code is IDA, then the property should have been directly observed, for the purpose of this specific publication, for a live isolate by one of the authors, or an expert or reputable institution mentioned in the acknowledgements.