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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of the thermophilic sulfate-reducing ocean bacterium Thermodesulfatator indicus type strain (CIR29812T)

Code value %agea Description
J 155 6.9 Translation, ribosomal structure and biogenesis
A 2 0.1 RNA processing and modification
K 72 3.2 Transcription
L 144 6.4 Replication, recombination and repair
B 2 0.1 Chromatin structure and dynamics
D 35 1.6 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 17 0.8 Defense mechanisms
T 114 5.1 Signal transduction mechanisms
M 129 5.8 Cell wall/membrane biogenesis
N 84 3.8 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 83 3.7 Intracellular trafficking and secretion, and vesicular transport
O 88 3.9 Posttranslational modification, protein turnover, chaperones
C 151 6.8 Energy production and conversion
G 67 3.0 Carbohydrate transport and metabolism
E 166 7.4 Amino acid transport and metabolism
F 58 2.6 Nucleotide transport and metabolism
H 123 5.5 Coenzyme transport and metabolism
I 39 1.7 Lipid transport and metabolism
P 82 3.7 Inorganic ion transport and metabolism
Q 19 0.9 Secondary metabolites biosynthesis, transport and catabolism
R 225 10.1 General function prediction only
S 152 6.8 Function unknown
- 388 17.4 Not in COGs
  1. a) The percentage is based on the total number of protein coding genes in the annotated genome.