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Table 4. Number of genes associated with the general COG functional categories

From: Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T)

Code value %age Description
J 173 3.6 Translation, ribosomal structure and biogenesis
A 3 0.1 RNA processing and modification
K 509 10.7 Transcription
L 226 4.7 Replication, recombination and repair
B 3 0.1 Chromatin structure and dynamics
D 40 0.8 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 68 1.4 Defense mechanisms
T 220 4.6 Signal transduction mechanisms
M 191 4.0 Cell wall/membrane biogenesis
N 6 0.1 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 52 1.1 Intracellular trafficking and secretion, and vesicular transport
O 152 3.2 Posttranslational modification, protein turnover, chaperones
C 369 7.7 Energy production and conversion
G 294 6.2 Carbohydrate transport and metabolism
E 381 8.0 Amino acid transport and metabolism
F 93 2.0 Nucleotide transport and metabolism
H 223 4.7 Coenzyme transport and metabolism
I 291 6.1 Lipid transport and metabolism
P 210 4.4 Inorganic ion transport and metabolism
Q 264 5.5 Secondary metabolites biosynthesis, transport and catabolism
R 649 13.6 General function prediction only
S 364 7.6 Function unknown
- 1,523 26.4 Not in COGs