Table 3. Genome Statistics
From: Complete genome sequence of Treponema pallidum strain DAL-1
Attribute | Value | % of Totala |
|---|---|---|
Genome size (bp) | 1,139,971 | 100.00 |
DNA coding region (bp) | 1,073,595 | 94.2 |
DNA G+C content (bp) | 601,817 | 52.8 |
Number of replicons | 1 | |
Extra-chromosomal elements | 0 | |
Total genes | 1,122 | 100.00 |
RNA genes | 54 | 4.8 |
rRNA operons | 2 | |
Protein-coding genes | 1,068 | 95.2 |
Pseudogenes | 9 | 0.8 |
Protein coding genes with function prediction | 691 | 61.6 |
Protein coding genes in paralog clusters | 178 | 15.9 |
Protein coding genes assigned to COGs | 756 | 67.4 |
Protein coding genes assigned Pfam domains | 763 | 68.0 |
Protein coding genes with signal peptides | 203 | 18.1 |
Protein coding genes with transmembrane helices | 260 | 23.2 |