Table 3. Nucleotide content and gene count levels of the genome
From: Complete Genome Sequence of Clostridium clariflavum DSM 19732
Attribute | Value | % of totala |
|---|---|---|
Genome size (bp) | 4,897,678 | 100.00% |
DNA Coding region (bp) | 3,915,750 | 79.95% |
DNA G+C content (bp) | 1,749,312 | 35.72% |
Total genesb | 4,229 | 100.00% |
RNA genes | 98 | 2.32% |
rRNA genes | 6 | Â |
Protein-coding genes | 4,131 | 97.68% |
Pseudo genes | 239 | 5.65% |
Genes with function prediction | 3,014 | 71.27% |
Genes in paralog clusters | 585 | 13.83% |
Genes assigned to COGs | 2,850 | 67.39% |
Genes assigned Pfam domains | 3,029 | 71.62% |
Genes with signal peptides | 1,003 | 23.72% |
Genes with transmembrane helices | 1,047 | 24.76% |