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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4T)

Code value %age Description
J 173 4.0 Translation, ribosomal structure and biogenesis
A 0 0.0 RNA processing and modification
K 338 7.8 Transcription
L 216 5.0 Replication, recombination and repair
B 1 0.2 Chromatin structure and dynamics
D 36 0.8 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 126 2.9 Defense mechanisms
T 272 6.3 Signal transduction mechanisms
M 372 8.6 Cell wall/membrane/envelope biogenesis
N 14 0.3 Cell motility
Z 1 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 73 1.7 Intracellular trafficking, secretion, and vesicular transport
O 132 3.1 Posttranslational modification, protein turnover, chaperones
C 204 4.7 Energy production and conversion
G 351 8.1 Carbohydrate transport and metabolism
E 304 7.0 Amino acid transport and metabolism
F 86 2.0 Nucleotide transport and metabolism
H 161 3.7 Coenzyme transport and metabolism
I 158 3.7 Lipid transport and metabolism
P 226 5.2 Inorganic ion transport and metabolism
Q 99 2.3 Secondary metabolites biosynthesis, transport and catabolism
R 620 14.3 General function prediction only
S 372 8.6 Function unknown
- 2,113 35.1 Not in COGs