Skip to main content

Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of the thermophilic sulfur-reducer Desulfurobacterium thermolithotrophum type strain (BSAT) from a deep-sea hydrothermal vent

Code value %age Description
J 142 9.7 Translation, ribosomal structure and biogenesis
A 0 0.0 RNA processing and modification
K 47 3.2 Transcription
L 126 8.6 Replication, recombination and repair
B 1 0.1 Chromatin structure and dynamics
D 20 1.4 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 13 0.9 Defense mechanisms
T 52 3.6 Signal transduction mechanisms
M 110 7.5 Cell wall/membrane/envelope biogenesis
N 67 4.6 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 74 5.1 Intracellular trafficking, secretion, and vesicular transport
O 55 3.8 Posttranslational modification, protein turnover, chaperones
C 113 7.7 Energy production and conversion
G 42 2.9 Carbohydrate transport and metabolism
E 108 7.4 Amino acid transport and metabolism
F 57 3.9 Nucleotide transport and metabolism
H 88 6.0 Coenzyme transport and metabolism
I 38 2.6 Lipid transport and metabolism
P 57 3.9 Inorganic ion transport and metabolism
Q 13 0.9 Secondary metabolites biosynthesis, transport and catabolism
R 140 9.6 General function prediction only
S 97 6.6 Function unknown
- 264 16.6 Not in COGs