Table 4. Number of genes associated with the general COG functional categories
Code | Value | % agea | Description |
|---|---|---|---|
J | 160 | 3.7 | Translation |
A | 0 | 0.0 | RNA processing and modification |
K | 118 | 2.7 | Transcription |
L | 186 | 4.3 | Replication, recombination and repair |
B | 1 | 0.02 | Chromatin structure and dynamics |
D | 20 | 0.46 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 52 | 1.2 | Defense mechanisms |
T | 91 | 2.1 | Signal transduction mechanisms |
M | 206 | 4.7 | Cell wall/membrane biogenesis |
N | 26 | 0.6 | Cell motility |
Z | 1 | 0.02 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 44 | 1.0 | Intracellular trafficking and secretion |
O | 130 | 3.0 | Posttranslational modification, protein turnover, chaperones |
C | 123 | 2.8 | Energy production and conversion |
G | 64 | 1.5 | Carbohydrate transport and metabolism |
E | 141 | 3.2 | Amino acid transport and metabolism |
F | 62 | 1.4 | Nucleotide transport and metabolism |
H | 89 | 2.1 | Coenzyme transport and metabolism |
I | 90 | 2.1 | Lipid transport and metabolism |
P | 102 | 2.4 | Inorganic ion transport and metabolism |
Q | 52 | 1.2 | Secondary metabolites biosynthesis, transport and catabolism |
R | 376 | 8.7 | General function prediction only |
S | 188 | 4.3 | Function unknown |
- | 2226 | 51.0 | Not in COGs |