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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Desulfurispirillum indicum strain S5T

Code

Value

% agea

Description

J

149

6.24

Translation

K

116

4.86

Transcription

L

143

5.99

Replication, recombination and repair

B

1

0.04

Chromatin structure and dynamics

D

34

1.42

Cell cycle control, mitosis and meiosis

V

36

1.51

Defense mechanisms

T

259

10.85

Signal transduction mechanisms

M

148

6.20

Cell wall/membrane biogenesis

N

120

5.03

Cell motility

Z

1

0.04

Cytoskeleton

U

85

3.56

Intracellular trafficking and secretion

O

98

4.10

Posttranslational modification, protein turnover, chaperones

C

167

6.99

Energy production and conversion

G

73

3.06

Carbohydrate transport and metabolism

E

148

6.20

Amino acid transport and metabolism

F

59

2.47

Nucleotide transport and metabolism

H

128

5.36

Coenzyme transport and metabolism

I

54

2.26

Lipid transport and metabolism

P

143

5.99

Inorganic ion transport and metabolism

Q

24

1.01

Secondary metabolites biosynthesis, transport and catabolism

R

228

9.55

General function prediction only

S

174

7.29

Function unknown

-

531

19.90

Not in COGs

  1. a) The total is based on the total number of protein coding genes in the annotated genome.