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Table 4. Number of genes associated with the general COG functional categories

From: Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2T)

Code value %age Description
J 168 4.7 Translation, ribosomal structure and biogenesis
A 3 0.1 RNA processing and modification
K 211 5.9 Transcription
L 276 7.7 Replication, recombination and repair
B 1 0.0 Chromatin structure and dynamics
D 48 1.3 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 70 2.0 Defense mechanisms
T 208 5.8 Signal transduction mechanisms
M 266 7.4 Cell wall/membrane/envelope biogenesis
N 56 1.6 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 102 2.9 Intracellular trafficking, secretion, and vesicular transport
O 162 4.5 Posttranslational modification, protein turnover, chaperones
C 289 8.1 Energy production and conversion
G 127 3.6 Carbohydrate transport and metabolism
E 210 5.9 Amino acid transport and metabolism
F 59 1.7 Nucleotide transport and metabolism
H 143 4.0 Coenzyme transport and metabolism
I 82 2.3 Lipid transport and metabolism
P 196 5.5 Inorganic ion transport and metabolism
Q 58 1.6 Secondary metabolites biosynthesis, transport and catabolism
R 407 11.4 General function prediction only
S 437 12.2 Function unknown
- 1,319 28.7 Not in COGs