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Table 3. Genome Statistics

From: Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2T)

Attribute Value % of Total
Genome size (bp) 4,691,711 100.00%
DNA coding region (bp) 4,147,061 88.39%
DNA G+C content (bp) 2,573,778 54.87%
Number of scaffolds 4  
Number of contigs 15  
Total genes 4,594 100.00%
RNA genes 52 1.15%
rRNA operons 2  
Protein-coding genes 4,542 98.85%
Pseudo genes 213 4.64%
Genes with function prediction 2,918 63.52%
Genes in paralog clusters 2,282 49.67%
Genes assigned to COGs 3,275 71.29%
Genes assigned Pfam domains 3,338 72.66%
Genes with signal peptides 971 21.14%
Genes with transmembrane helices 1,027 22.36%
CRISPR repeats 4