Table 2. Genome sequencing project information
From: Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2T)
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Improved-high-quality-draft |
MIGS-28 | Libraries used | Three genomic libraries: one 454 pyrosequence standard library, one 454 PE library (12 kb insert size), one Illumina library |
MIGS-29 | Sequencing platforms | Illumina GAii, 454 GS FLX Titanium |
MIGS-31.2 | Sequencing coverage | 111.5 Ă— Illumina; 28.9 Ă— pyrosequence |
MIGS-30 | Assemblers | Newbler version 2.3-PreRelease-6/30/2009, Velvet version 1.0.13, phrap SPS-4.24 |
MIGS-32 | Gene calling method | Prodigal 1.4, GenePRIMP |
| Â | INSDC ID | Not yet available |
| Â | Genbank Date of Release | Not yet available |
| Â | GOLD ID | Gi03023 |
| Â | NCBI project ID | 51139 |
| Â | Database: IMG-GEBA | 2506520049 |
MIGS-13 | Source material identifier | DSM 5205 |
| Â | Project relevance | Tree of Life, GEBA |