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Table 1. Classification and general features of A. vinosum DSM 180T according to the MIGS recommendations [11]

From: Complete genome sequence of Allochromatium vinosum DSM 180T

MIGS ID

Property

Term

Evidence code

 

Classification

Domain Bacteria

TAS [12]

 

Phylum Proteobacteria

TAS [13]

 

Class Gammaproteobacteria

TAS [14,15]

 

Order Chromatiales

TAS [14,16]

 

Family Chromatiaceae

TAS [17–19]

 

Genus Allochromatium

TAS [20]

 

Species Allochromatium vinosum

TAS [20]

 

Type strain DSM 180

TAS [20]

 

Gram stain

negative

TAS [20]

 

Cell shape

rod

TAS [20]

 

Motility

motile

TAS [20]

 

Sporulation

nonsporulating

NAS

 

Temperature range

25–35°C

TAS [21]

 

Optimum temperature

30°C

TAS [21]

 

pH range

6.5–7.6

TAS [21]

 

pH optimum

7.0–7.3

TAS [21]

 

Salinity

Not required but low concentrations are tolerated Photolithoautotrophic growth: H2, sulfide, polysulfides, thiosulfate, sulfur, sulfite

TAS [21]

 

Energy source

Photolithoheterotrophic growth: formate, acetate, propionate, butyrate, fumarate succinate, pyruvate, malate, glycolate

TAS [21]

 

Chemolithoheterotrophic growth: H2, sulfide and thiosulfatas ee lectron donors, acetate, propionate, pyruvate, malate, fumarate, succinate

  

Chemolithoautotrophic growth: CO2 as carbon source, H2, sulfide, thiosulfate

 

MIGS-6

Habitat

Both pelagic and in littoral sediments

TAS [21]

MIGS-15

Biotic relationship

free-living

NAS

MIGS-14

Pathogenicity

None

TAS [22]

 

Biosafety level

1

TAS [22]

 

Isolation site

ditch water

TAS [23]

  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i. e. a direct report exists in the literature); NAS: Non-traceable Author Statement (i. e. not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [24]. If the evidence code is IDA, then the property was directly observed for a living isolate by one of the authors or an expert mentioned in the acknowledgements.