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Table 1. Classification and general features of A. vinosum DSM 180T according to the MIGS recommendations [11]

From: Complete genome sequence of Allochromatium vinosum DSM 180T

MIGS ID Property Term Evidence code
  Classification Domain Bacteria TAS [12]
  Phylum Proteobacteria TAS [13]
  Class Gammaproteobacteria TAS [14,15]
  Order Chromatiales TAS [14,16]
  Family Chromatiaceae TAS [1719]
  Genus Allochromatium TAS [20]
  Species Allochromatium vinosum TAS [20]
  Type strain DSM 180 TAS [20]
  Gram stain negative TAS [20]
  Cell shape rod TAS [20]
  Motility motile TAS [20]
  Sporulation nonsporulating NAS
  Temperature range 25–35°C TAS [21]
  Optimum temperature 30°C TAS [21]
  pH range 6.5–7.6 TAS [21]
  pH optimum 7.0–7.3 TAS [21]
  Salinity Not required but low concentrations are tolerated Photolithoautotrophic growth: H2, sulfide, polysulfides, thiosulfate, sulfur, sulfite TAS [21]
  Energy source Photolithoheterotrophic growth: formate, acetate, propionate, butyrate, fumarate succinate, pyruvate, malate, glycolate TAS [21]
  Chemolithoheterotrophic growth: H2, sulfide and thiosulfatas ee lectron donors, acetate, propionate, pyruvate, malate, fumarate, succinate
   Chemolithoautotrophic growth: CO2 as carbon source, H2, sulfide, thiosulfate  
MIGS-6 Habitat Both pelagic and in littoral sediments TAS [21]
MIGS-15 Biotic relationship free-living NAS
MIGS-14 Pathogenicity None TAS [22]
  Biosafety level 1 TAS [22]
  Isolation site ditch water TAS [23]
  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i. e. a direct report exists in the literature); NAS: Non-traceable Author Statement (i. e. not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [24]. If the evidence code is IDA, then the property was directly observed for a living isolate by one of the authors or an expert mentioned in the acknowledgements.