Table 3. Genome Statistics
From: Complete genome sequence of Halogeometricum borinquense type strain (PR3T)
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,944,467 | 100.00% |
DNA Coding region (bp) | 3,441,571 | 87.25% |
DNA G+C content (bp) | 2,364,339 | 59.94% |
Number of replicons | 1 | |
Extrachromosomal elements | 5 | |
Total genes | 3994 | 100.00% |
RNA genes | 57 | 1.90% |
rRNA operons | 2 | |
Protein-coding genes | 3937 | 98.57% |
Pseudogenes | 37 | 0.93% |
Genes with function prediction | 2486 | 62.24% |
Genes in paralog clusters | 741 | 18.55% |
Genes assigned to COGs | 2449 | 61.32% |
Genes assigned Pfam domains | 2385 | 59.71% |
Genes with signal peptides | 533 | 13.35% |
Genes with transmembrane helices | 971 | 24.31% |
CRISPR repeats | 1 |