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Table 4. Number of genes associated with the general COG functional categories.

From: Complete genome sequence of Thioalkalivibrio sp. K90mix

Code Value %age Description
J 156 6.57 Translation, ribosomal structure and biogenesis
A 1 .04 RNA processing and modification
K 86 3.62 Transcription
L 164 6.91 Replication, recombination and repair
B 2 0.08 Chromatin structure and dynamics
D 41 1.73 Cell cycle control, mitosis and meiosis
Y 0 0.0 Nuclear structure
V 35 1.47 Defense mechanisms
T 166 6.99 Signal transduction mechanisms
M 176 7.41 Cell wall/membrane biogenesis
N 94 3.96 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 97 4.09 Intracellular trafficking and secretion
O 110 4.63 Posttranslational modification, protein turnover, chaperones
C 146 6.15 Energy production and conversion
G 79 3.33 Carbohydrate transport and metabolism
E 155 6.53 Amino acid transport and metabolism
F 66 2.78 Nucleotide transport and metabolism
H 146 6.15 Coenzyme transport and metabolism
I 65 2.74 Lipid transport and metabolism
P 119 5.01 Inorganic ion transport and metabolism
Q 42 1.77 Secondary metabolites biosynthesis, transport and catabolism
R 240 10.11 General function prediction only
S 188 7.92 Function unknown
- 803 27.29 Not in COGs