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Figure 1. | Standards in Genomic Sciences

Figure 1.

From: Genome sequence of strain HIMB624, a cultured representative from the OM43 clade of marine Betaproteobacteria

Figure 1.

Phylogenetic tree based comparisons between 16S rRNA gene sequences from strain HIMB624, strain HTCC2181, type strains of related species within the family Methylophilaceae, and more distantly related Betaproteobacteria. Several Gammaproteobacteria and Alphaproteobacteria strains were used as outgroups. Sequence selection and alignment improvements were carried out using the ‘All-Species Living Tree’ project database [14] and the ARB software package [15]. The tree was inferred from 1,223 alignment positions using the RAxML maximum likelihood method [16]. Bootstrap support values, determined by RAxML [17], are displayed above branches if larger than 60% from 1000 replicates. The scale bar indicates substitutions per site.

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